z-logo
open-access-imgOpen Access
Pareuzebyella sediminis gen. nov., sp. nov., a novel marine bacterium in the family Flavobacteriaceae, isolated from a tidal flat sediment
Author(s) -
Zhaobin Huang,
Xiaomei Wei,
Qiliang Lai,
Shiyong Chen,
Jianjun Yuan
Publication year - 2020
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.004606
Subject(s) - biology , 16s ribosomal rna , phylogenetic tree , flavobacteriaceae , monophyly , strain (injury) , phylogenetics , clade , thermophile , botany , microbiology and biotechnology , bacteria , gene , genetics , anatomy
Two marine bacterial strains, designated S2-4-21 T and MT2-5-19, were isolated from two tidal flat sediments of cordgrass Spartina alterniflora and adjacent oyster culture field in Quanzhou bay, China, respectively. Both strains were Gram-staining-negative, rod-shaped, non-flagellated, non-motile, aerobic, had NaCl requirements, and contained carotenoid and flexirubin pigments. The 16S rRNA gene sequence similarity (99.8%), average nucleotide identity value (99.4%) and average amino acid identity (99.3%) between strain S2-4-21 T and strain MT2-5-19 strongly supported that they belonged to a single species. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain S2-4-21 T and strain MT2-5-19 formed a monophyletic branch affiliated to the family Flavobacteriaceae , sharing similarities of 94.6% with Euzebyella marina CY01 T and E. saccharophila 7SM30 T , and of 94.1 and 92.8% with E. algicola MEBiC 12267 T and Pseudozobellia thermophile DSM 19858 T , respectively. Phylogenomic analysis based on the whole genome sequences supported that the two strains formed a distinct monophyletic clade within Flavobacteriaceae members, which was phylogenetically different from the clades of Euzebyella and Pseudozobellia . The major respiratory quinone was menaquinone MK-6. The major fatty acids (>10%) consisted of C 15 : 0 iso, C 16 : 0 , summed feature 9 (C 17 : 1 iso ω 9 c /C 16 : 0 10-methyl) and C 17 : 0 iso 3-OH. The polar lipid profiles of strain S2-4-21 T and strain MT2-5-19 are identical, including phosphatidylethanolamine, four unidentified aminolipids, and four unidentified lipids. The genomic size was 4.9–5.0 Mb with genomic DNA G+C content of 41.5 mol%. Based on the above characteristics, strains S2-4-21 T and MT2-5-19 represented a novel species of a novel genus in the family Flavobacteriaceae . Thus, Pareuzebyella sediminis gen. nov. sp. nov. is proposed with type strain S2-4-21 T (=MCCC 1K03818 T =KCTC 72152 T ), and another strain MT2-5-19 (=KCTC 72539=MCCC 1K03874).

The content you want is available to Zendy users.

Already have an account? Click here to sign in.
Having issues? You can contact us here
Accelerating Research

Address

John Eccles House
Robert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom