Open AccessChryseoglobus indicus sp. nov., isolated from deep sea water
Author(s) -
Shengxiang Pei,
Xie F,
Wenjing Wang,
Shuang Zhang,
Gaiyun Zhang
Publication year - 2021
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.004564
Subject(s) - biology , 16s ribosomal rna , phylogenetic tree , strain (injury) , whole genome sequencing , microbiology and biotechnology , phylogenetics , ribosomal rna , genome , gene , botany , genetics , anatomy
A novel Gram-stain-positive, motile, aerobic, non-spore-forming and slender rod-shaped actinobacterium, designated strain CTD02-10-2 T , was isolated from deep sea water of the Indian Ocean. Phylogenetic analysis based on the 16S rRNA gene sequence indicated that strain CTD02-10-2 T was grouped into a separated branch with Chryseoglobus frigidaquae JCM 14730 T (98.4 % nucleotide sequence identity). The respiratory quinones were menaquinones with 11, 12, 13 and 14 isoprene units and anteiso-C 15 : 0 , iso-C 16 : 0 , anteiso-C 15 : 1 A and anteiso-C 17 : 0 were the major fatty acids. The major polar lipids were phosphatidylglycerol, diphosphatidylglycerol and three unknown glycolipids. The genome of strain CTD02-10-2 T was 2.59 Mb, with a DNA G+C content of 69.6 mol% and contained genes involved in the biosynthesis of alkylresorcinol, ansamycin, and carotenoids. In silico DNA–DNA hybridization and average nucleotide identity values for whole-genome sequence comparisons between strain CTD02-10-2 T and C. frigidaquae JCM 14730 T were clearly below the thresholds used for the delineation of a new species. Based on its morphological and chemotaxonomic characteristics, as well as genotypic data, strain CTD02-10-2 T was classified as a novel species of the genus Chryseoglobus , for which the name Chryseoglobus indicus sp. nov. is proposed. The type strain is CTD02-10-2 T (=JCM 33842 T =MCCC 1A16619 T ).