z-logo
open-access-imgOpen Access
Roseovarius gahaiensis sp. nov., isolated from Gahai Saline Lake, PR China
Author(s) -
Xia Sun,
Fang Wang,
Yang Liu,
Ying Lu
Publication year - 2020
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.004411
Subject(s) - 16s ribosomal rna , biology , phylogenetic tree , strain (injury) , phosphatidylglycerol , genome size , gene , ribosomal rna , microbiology and biotechnology , botany , genome , genetics , anatomy , phospholipid , membrane , phosphatidylcholine
A Gram-stain-negative, aerobic, non-motile and ovoid- to rod-shaped bacterial strain, designated GH877 T , was isolated from a water sample of Gahai saline lake in Qaidam Basin,PR China. The isolate grew at 5–45 °C, pH 6.0–9.0 (optima, 37 °C and pH 7.5) and with 0.5–20 % (w/v) NaCl (optimum, 2.0 %). The neighbour-joining phylogenetic tree of 16S rRNA gene sequences showed that strain GH877 T belonged to the genus Roseovarius , and had highest 16S rRNA gene sequence similarity of 97.7 % to Roseovarius pacificus 81-2 T , followed by Roseovarius halotolerans HJ50 T (97.5 %) and Roseovarius litoreus GSW-M15 T (96.8 %). Genome sequencing revealed a genome size of 3 378 519 bp and a G+C content of 59.8 mol %. Up-to-date bacterial core gene set analysis indicated that strain GH877 T represents one independent lineage with R. pacificus DSM29589 T . The average nucleotide identity values of GH877 T with R. pacificus 81-2 T and R. halotolerans HJ50 T are 80.7 and 77.3 %, respectively. In silico DNA–DNA hybridization values between strain GH877 T and R. pacificus 81-2 T and R. halotolerans HJ50 T are 23.2 and 20.0 %, respectively. Q-10 was the predominant respiratory quinone and summed feature 8 (C 18  :  1 ω7 c and/or C 18  :  1 ω6 c ) and C 16  :  0 were the major cellular fatty acids. The polar lipids of strain GH877 T consisted of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine and two unidentified phosphoglycolipids. Based on polyphasic taxonomic analysis, strain GH877 T is proposed to represent a novel species of the genus Roseovarius , for which the name Roseovarius gahaiensis sp. nov. is proposed. (type strain GH877 T =CGMCC 1.13971 T =KCTC 72576 T ).

The content you want is available to Zendy users.

Already have an account? Click here to sign in.
Having issues? You can contact us here
Accelerating Research

Address

John Eccles House
Robert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom