z-logo
open-access-imgOpen Access
Novosphingobium ovatum sp. nov., isolated from a freshwater mesocosm
Author(s) -
Wen-Ming Chen,
Cheng-Ye Cai,
DerShyan Sheu,
Jyh-Ming Tsai,
ShihYi Sheu
Publication year - 2020
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.004402
Subject(s) - biology , 16s ribosomal rna , phylogenetic tree , microbiology and biotechnology , spermidine , strain (injury) , bacteria , gene , biochemistry , genetics , enzyme , anatomy
A bacterial strain, designated FSY-8 T , was isolated from a freshwater mesocosm in Taiwan and characterized using the polyphasic taxonomy approach. Cells of strain FSY-8 T were aerobic, Gram-stain-negative, rod-shaped, non-motile and formed yellow coloured colonies on Reasoner's 2A agar. Growth occurred at 20–40 °C (optimum, 30–37 °C) and pH 5–7 (optimum, pH 6) and in the presence of 0–0.5 % NaCl (optimum, 0 %, w/v). The major fatty acids (>10 %) of strain FSY-8 T were summed feature 8 (C 18 : 1  ω 7 c and/or C 18 : 1  ω 6 c ) and summed feature 3 (C 16 : 1  ω 7 c and/or C 16 : 1  ω 6 c ). The polar lipid profile consisted of a mixture of phosphatidylethanolamine, phosphatidylglycerol, phosphatidylcholine, phosphatidylmonomethylethanolamine, phosphatidyldimethylethanolamine, sphingoglycolipid, diphosphatidylglycerol, an uncharacterized aminophospholipid, an uncharacterized glycolipid and an uncharacterized lipid. The major polyamine was spermidine. The major isoprenoid quinone was Q-10. The DNA G+C content was 64.8 mol %. Phylogenetic analyses based on 16S rRNA gene sequences and coding sequences of 92 protein clusters indicated that strain FSY-8 T formed a phylogenetic lineage in the genus Novosphingobium . Strain FSY-8 T showed 71.6–77.2 % average nucleotide identity and 19.9–22.8 % digital DNA–DNA hybridization identity with the strains of other Novosphingobium species. On the basis of phenotypic and genotypic properties and phylogenetic inference, strain FSY-8 T should be classified in a novel species of the genus Novosphingobium , for which the name Novosphingobium ovatum sp. nov. is proposed. The type strain is FSY-8 T (=BCRC 81051 T =LMG 30053 T =KCTC 52812 T ).

The content you want is available to Zendy users.

Already have an account? Click here to sign in.
Having issues? You can contact us here
Accelerating Research

Address

John Eccles House
Robert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom