z-logo
open-access-imgOpen Access
Hymenobacter polaris sp. nov., a psychrotolerant bacterium isolated from an Arctic station
Author(s) -
Ram Hari Dahal,
Dhiraj Kumar Chaudhary,
Dong-Uk Kim,
Jaisoo Kim
Publication year - 2020
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.004356
Subject(s) - biology , 16s ribosomal rna , phylogenetic tree , strain (injury) , bacteria , genomic dna , genus , phylogenetics , microbiology and biotechnology , botany , gene , genetics , anatomy
A pink-pigmented, non-motile, Gram-stain-negative, rod-shaped bacterium, designated RP-2-7 T , was obtained from soil sampled at the Arctic station, Spitsbergen, Svalbard, Norway. Cells were strictly aerobic, psychrotolerant, grew optimally at 15–20 °C and hydrolysed CM-cellulose. Phylogenetic analysis based on its 16S rRNA gene sequence revealed that strain RP-2-7 T formed a lineage within the family Hymenobacteraceae and clustered with members of the genus Hymenobacter . Its closest relative was Hymenobacter marinus KJ035 T (97.6 % sequence similarity). The sequence similarities to other strains were ≤96.9 %. The principal respiratory quinone was MK-7 and the major polar lipids were phosphatidylethanolamine and an unidentified aminophospholipid. The predominant cellular fatty acids were summed feature 3 (C 16 : 1  ω 7 c and/or C 16 : 1  ω 6 c ), anteiso-C 15 : 0 , iso-C 15 : 0 , C 16 : 1  ω 5 c and summed featured 4 (iso-C 17 : 1 I and/or anteiso-C 17 : 1 B). The DNA G+C content was 62.8 mol%. In addition, the average nucleotide identity and in silico DNA–DNA hybridization relatedness values between strain RP-2-7 T and closely related strains were lower than species demarcation thresholds. Based on the resuls of genomic, chemotaxonomic, phenotypic and phylogenetic analyses, strain RP-2-7 T represents novel species in the genus Hymenobacter , for which the name Hymenobacter polaris sp. nov. is proposed. The type strain is RP-2-7 T (=KACC 21670 T =NBRC 114391 T ).

The content you want is available to Zendy users.

Already have an account? Click here to sign in.
Having issues? You can contact us here
Accelerating Research

Address

John Eccles House
Robert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom