Jeotgalibaca ciconiae sp. nov., isolated from the faeces of an Oriental stork
Author(s) -
So-Yeon Lee,
Woorim Kang,
Pil Soo Kim,
Hyun Sik Kim,
Hojun Sung,
NaRi Shin,
JiHyun Yun,
JaeYun Lee,
JuneYoung Lee,
MiJa Jung,
YunSeok Jeong,
Euon Jung Tak,
Jeong Eun Han,
DongWook Hyun,
Myung-Suk Kang,
KiEun Lee,
ByoungHee Lee,
JinWoo Bae
Publication year - 2020
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.004163
Subject(s) - biology , 16s ribosomal rna , peptidoglycan , rhamnose , strain (injury) , microbiology and biotechnology , bacteria , diamino acid , ribosomal rna , biochemistry , galactose , gene , gene sequence , genetics , anatomy
A novel, Gram-stain-positive, non-spore-forming, facultatively anaerobic bacterium, designated strain H21T32 T , was isolated from the faeces of an Oriental stork, Ciconia boyciana . Cells formed cocci grouped in pairs, tetrads or conglomerates, and colonies on solid medium were pale yellow. Strain H21T32 T belonged to the genus Jeotgalibaca , family Carnobacteriaceae , order Lactobacillales and class Bacilli . The 16S rRNA gene sequences of the strain showed 97.06–97.34, 96.17–96.31 and 95.93–96.07 % similarity to the type strains of Jeotgalibaca arthritidis , J. porci and J. dankookensis , respectively. The strain grew at 10–37 °C (optimum temperature: 30 °C), with 0–7 % (w/v) NaCl (optimum salinity: 0.5 %) and at pH 7–9 (optimum pH: 8). The main cellular fatty acids were C 16 : 1 ω 9 c , C 18 : 1 ω 9 c and C 16 : 0 . The major polar lipids were diphosphatidylglycerol and phosphatidylglycerol. Respiratory quinones were not detected. Sugar components of the peptidoglycan were rhamnose, ribose and glucose. Amino acid components of the cell wall were l -alanine, d -glucose, l -lysine, glycine and aspartic acid. The DNA G+C content of the strain was 37.1 mol%. Average nucleotide identity between strain H21T32 T and J. arthritidis CECT 9157 T was 77.02 %, confirming that strain H21T32 T represents a novel species of the genus Jeotgalibaca , for which the name Jeotgalibaca ciconiae sp. nov. is proposed. The type strain is H21T32 T (=KCTC 33991 T =JCM 33222 T ).
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