
Roseovarius bejariae sp. nov., a moderately halophilic bacterium isolated from a hypersaline steep-sided river bed
Author(s) -
David J. Castro,
Andreina Gomez-Altuve,
José Carlos Reina,
Miguel Delgado Rodríguez,
Inmaculada Sampedro,
Inmaculada Llamas,
Fernando Martı́nez-Checa
Publication year - 2020
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.004154
Subject(s) - biology , 16s ribosomal rna , halophile , strain (injury) , botany , bacteria , microbiology and biotechnology , genetics , anatomy
An aerobic, Gram-stain-negative ovoid, designated as strain A21 T , was isolated using the dilution-to-extinction method from a soil sample taken from Rambla Salada, an athalassohaline habitat located in Murcia (south-eastern Spain). Strain A21 T is non-motile, has a respiratory metabolism and grows at NaCl concentrations within the range 0.5–15 % (w/v) [optimum, 5 % (w/v)], at 5–35 °C (optimum, 28 °C) and at pH 6–8 (optimum, pH 7.0). This strain is positive for catalase activity, oxidase activity and nitrate reduction. The 16S rRNA gene sequence indicates that it belongs to the genus Roseovarius in the class Alphaproteobacteria . The most closely related species are Roseovarius pacificus and Roseovarius halotolerans to which the strain A21 T shows 16S rRNA gene sequence similarity values of 98.06 and 97.7 %, respectively. The average nucleotide identity in blast and digital DNA–DNA hybridization values between strain A21 T and R. pacificus LMG 24575 T are 76.8 and 21 %, respectively. The DNA G+C content based on the genome is 61.28 mol%. The major fatty acids (>5 % of the total fatty acids) of strain A21 T are C 18 : 1 ω7 c /C 18 : 1 ω6 c and C 16 : 0 . The only detected isoprenoid quinone in strain A21 T is ubiquinone 10 (Q-10). The polar lipid profile contains phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol and three unidentified polar lipids. Based on the phylogenetic, genotypic, phenotypic and chemotaxonomic data, the strain represents a novel species of the genus Roseovarius , for which the name Roseovarius bejariae sp. nov. is proposed. Strain A21 T (=CECT 9817 T =LMG 31311 T ) is the type strain.