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Devosia marina sp. nov., isolated from deep seawater of the South China Sea, and reclassification of Devosia subaequoris as a later heterotypic synonym of Devosia soli
Author(s) -
Yang Liu,
Juan Du,
Jun Zhang,
Qiliang Lai,
Zongze Shao
Publication year - 2020
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.004130
Subject(s) - biology , 16s ribosomal rna , phylogenetic tree , strain (injury) , botany , microbiology and biotechnology , bacteria , genetics , gene , anatomy
A Gram-stain-negative, aerobic, rod-shaped and motile bacterial strain, designated L53-10-65 T , was isolated from deep seawater of the South China Sea. Strain L53-10-65 T was found to grow at 4–41 °C (optimum, 28 °C), at pH 5.0–9.0 (pH 7.0–8.0) and in 0–7 % (w/v) NaCl (2 %). Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain L53-10-65 T fell within the genus Devosia , with the highest similarity to Devosia indica IO390501 T (98.4 %), followed by ‘ Devosia lucknowensis ’ L15 T (97.7 %) and Devosia riboflavina IFO 13584 T (96.8 %). The digital DNA–DNA hybridization (dDDH) values between strain L53-10-65 T and the three relatives above were 43.7, 21.5 and 20.9 %, respectively; the average nucleotide identity (ANI) values were 91.3, 78.4 and 76.8 %, respectively. These values were below the 70 % dDDH and 95–96 % ANI thresholds for bacterial species delineation. The major cellular fatty acids of strain L53-10-65 T were summed feature 8 (C 18 : 1 ω 7 c and/or C 18 : 1 ω 6 c ), C 18 : 1 ω 7 c 11-methyl and C 16 : 0 . The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol and glycolipids. The respiratory quinone was identified as Q-10. The DNA G+C content of strain L53-10-65 T was 61.3 mol%. Based on the results of phylogenetic analysis and distinctive phenotypic characteristics, strain L53-10-65 T is concluded to represent a novel species of the genus Devosia , for which the name Devosia marina sp. nov. is proposed. The type strain of the species is L53-10-65 T (=MCCC 1A05139 T =KCTC 72888 T ). Moreover, we propose that Devosia subaequoris is a later heterotypic synonym of Devosia soli based on the present results.

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