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Classification of ‘Streptomyces hyalinum’ Hamada and Yokoyama as Embleya hyalina sp. nov., the second species in the genus Embleya, and emendation of the genus Embleya
Author(s) -
Hisayuki Komaki,
Akira Hosoyama,
Akane Kimura,
Natsuko Ichikawa,
Yasuhiro Igarashi,
Tomohiko Tamura
Publication year - 2020
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.003941
Subject(s) - biology , 16s ribosomal rna , phylogenetic tree , genus , strain (injury) , phylogenetics , botany , type species , streptomyces , gene , microbiology and biotechnology , genetics , bacteria , anatomy
The 16S rRNA gene sequence of ‘ Streptomyces hyalinum ’ NBRC 13850 T shows 99.7 % similarity to that of Embleya scabrispora DSM 41855 T ; however, it shows <96.1 % similarity to any other type strains, including Streptomyces spp. Phylogenetic analysis based on 16S rRNA gene sequences clearly suggests that ‘ S. hyalinum ’ belongs to the genus Embleya rather than to Streptomyces . The strain possesses ll -diaminopimelic acid in the cell wall. The major menaquinone observed is MK-9(H 6 ), and MK-9(H 4 ) and MK-9(H 8 ) are minor components. The major polar lipids are diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylinositol. In this study, the whole genome of strain NBRC 13850 T was sequenced, and digital DNA–DNA hybridisation between ‘ S. hyalinum ’ NBRC 13850 T and E. scabrispora DSM 41855 T demonstrated 31.2 % of relatedness value between the two genomes. Morphological, chemotaxonomic, biochemical and physiological data also revealed that ‘ S. hyalinum ’ can be easily differentiated from E. scabrispora (the only the valid species of the genus Embleya ) and that it merits separate species status. This phenotypic and genetic evidence reveals that ‘ S. hyalinum ’ represents a novel species of the genus Embleya ; the name Embleya hyalina sp. nov. is proposed for this species. The type strain is NBRC 13850 T (=ATCC 29817 T =MB 891-A1 T ). We also emended the description of the genus Embleya considering the feature of E. hyalina .

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