Open AccessParacoccus luteus sp. nov., isolated from the intestine of grass carp
Author(s) -
Ming Hong,
Li-Jiao Cheng,
Chenlong Ding,
Mingming Niu,
Zhuo-Li Zhao,
Wei-Li Ji,
Lingyu Zhang,
Yanmin Zhang,
Xiaolin Meng,
Guoxing Nie
Publication year - 2020
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.003790
Subject(s) - biology , 16s ribosomal rna , microbiology and biotechnology , grass carp , strain (injury) , bacteria , sequence analysis , gene , biochemistry , genetics , fishery , anatomy , fish <actinopterygii>
A novel Gram-negative bacterium, designated CFH 10530 T , was isolated from the intestine of grass carp. The sample was collected from the aquaculture training base at the College of Fisheries, Henan Normal University, Xinxiang, PR China. Cells of strain CFH 10530 T were coccoid, ovoid or short-rod-shaped, aerobic, non-spore-forming and non-motile. 16S rRNA gene sequence analysis demonstrated that strain CFH 10530 T was closely related to Paracoccus endophyticus SYSUP0003 T (97.7 % sequence similarity), Paracoccus halophilus HN-182 T (96.5 %) and Paracoccus panacisoli DCY94 T (96.1 %). The strain grew optimally at 25-28 °C, at pH 7.0 and with 0-2 % (w/v) NaCl. Cells were positive for catalase and oxidase, nitrate was reduced and H 2 S was not produced. The isoprenoid quinone was Q-10. Major cellular fatty acids were summed feature 8, C 18 : 0 and C 18 : 0 3-OH. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylcholine, one unidentified aminolipid and five unidentified polar lipids. The genome size was 3 331 229 bp with a G+C content of 69.6 mol%. The average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values between CFH 10530 T and the other species of the genus Paracoccus were found to be below the recommended levels for species delineation (ANIm <85, ANIb <80 and dDDH <24 %). Based on its physiological properties, chemotaxonomic characteristics and low ANI and dDDH results, strain CFH 10530 T is considered to represent a novel species for which the name Paracoccus luteus sp. nov., is proposed. The type strain is CFH 10530 T (=KCTC 62919 T =CGMCC 1.16597 T ).