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Hydrogenophaga borbori sp. nov., isolated from activated sludge
Author(s) -
Gyu-Min Choi,
Soon Youl Lee,
Sang Yong Kim,
Ji-Hyang Wee,
WanTaek Im
Publication year - 2020
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - Uncategorized
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.003787
Subject(s) - 16s ribosomal rna , biology , microbiology and biotechnology , botany , biochemistry , gene
A novel Gram-stain-negative, yellowish-pigmented bacterial strain, designated LA-38 T , was isolated from activated sludge of wastewater treatment plants in Hanam city, South Korea. Cell of LA-38 T were rod-shaped, aerobic, motile and non-spore-forming. In phylogenetic analyses based on 16S rRNA genes, LA-38 T clustered with species of the genus Hydrogenophaga and appeared closely related to Hydrogenophaga intermedia DSM 5680 T (99.2 % similarity), Hydrogenophaga palleronii DSM 63 T (98.2 %), Hydrogrenophaga laconesensis KCTC 42478 T (98.1 %), Hydrogenophaga. atypica DSM 15342 T (98.1 %), Hydrogenophaga defluvii DSM 15341 T (98.0 %) and Hydrogenophaga taeniospiralis DSM 2082 T (97.2 %). The average nucleotide identities between LA-38 T and the closely related strains were 79.3-88.5 %, indicating that LA-38 T represents a novel species of the genus Hydrogenophaga . The DNA G+C content of the genomic DNA was 69.9 mol% and ubiquinone Q-8 was the predominant respiratory quinone. The major cellular fatty acids (>5 %) were C 16 : 0 , cyclo-C 19 : 0 , C 16 : 1 ω7 c and/or C 16 : 1 ω6 c (summed feature 3), and C 18 : 1 ω7 c and/or C 18 : 1 ω6 c (summed feature 8). The major polar lipids consisted of phosphatidylglycerol, diphosphatidylglycerol and phosphatidylethanolamine, the major polyamines were 2-hydroxyputrescine and putrescine. ANI calculation, physiological and biochemical characteristics indicated that LA-38 T represents a novel species of the genus Hydrogenophaga , for which the name Hydrogenophaga borbori sp. nov. is proposed. The type strain is LA-38 T (=KACC 19730 T =LMG 30805 T ).

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