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Aggregatilinea lenta gen. nov., sp. nov., a slow-growing, facultatively anaerobic bacterium isolated from subseafloor sediment, and proposal of the new order Aggregatilineales ord. nov. within the class Anaerolineae of the phylum Chloroflexi
Author(s) -
Nozomi Nakahara,
Masaru K. Nobu,
Yoshihiro Takaki,
Masaru Miyazaki,
Eiji Tasumi,
Sanae Sakai,
Miyuki Ogawara,
Naoko Yoshida,
Hideyuki Tamaki,
Yuko Yamanaka,
Arata Katayama,
Takashi Yamaguchi,
Ken Takai,
Hiroyuki Imachi
Publication year - 2019
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.003291
Subject(s) - biology , 16s ribosomal rna , strain (injury) , bacteria , anaerobic exercise , botany , phylogenetic tree , microbiology and biotechnology , ribosomal rna , sediment , gene , biochemistry , genetics , physiology , anatomy , paleontology
A novel slow-growing, facultatively anaerobic, filamentous bacterium, strain MO-CFX2 T , was isolated from a methanogenic microbial community in a continuous-flow bioreactor that was established from subseafloor sediment collected off the Shimokita Peninsula of Japan. Cells were multicellular filamentous, non-motile and Gram-stain-negative. The filaments were generally more than 20 µm (up to approximately 200 µm) long and 0.5–0.6 µm wide. Cells possessed pili-like structures on the cell surface and a multilayer structure in the cytoplasm. Growth of the strain was observed at 20–37 °C (optimum, 30 °C), pH 5.5–8.0 (pH 6.5–7.0), and 0–30 g l −1 NaCl (5 g l −1 NaCl). Under optimum growth conditions, doubling time and maximum cell density were estimated to be approximately 19 days and ~10 5 cells ml −1 , respectively. Strain MO-CFX2 T grew chemoorganotrophically on a limited range of organic substrates in anaerobic conditions. The major cellular fatty acids were saturated C 16 : 0 (47.9 %) and C 18 : 0 (36.9 %), and unsaturated C 18 : 1 ω9c (6.0 %) and C 16 : 1 ω7 (5.1 %). The G+C content of genomic DNA was 63.2 mol%. 16S rRNA gene-based phylogenetic analysis showed that strain MO-CFX2 T shares a notably low sequence identity with its closest relatives, which were Thermanaerothrix daxensis GNS-1 T and Thermomarinilinea lacunifontana SW7 T (both 85.8 % sequence identity). Based on these phenotypic and genomic properties, we propose the name Aggregatilinea lenta gen. nov., sp. nov. for strain MO-CFX2 T (=KCTC 15625 T , =JCM 32065 T ). In addition, we also propose the associated family and order as Aggregatilineaceae fam. nov. and Aggregatilineales ord. nov., respectively.

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