Open AccessAlteromonas indica sp. nov., isolated from surface seawater from the Indian Ocean
Author(s) -
Danqiu Lin,
Yong Chen,
Shusheng Zhu,
Jun Yang,
Jigang Chen
Publication year - 2018
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.003078
Subject(s) - alteromonas , biology , 16s ribosomal rna , phylogenetic tree , strain (injury) , genus , botany , phylogenetics , bacteria , microbiology and biotechnology , gene , genetics , anatomy
A Gram-stain-negative bacterium, designated strain IO390401 T , was isolated from a seawater sample from the sulphide region of the Indian Ocean. Phylogenetic trees based on 16S rRNA gene sequences showed that strain IO390401 T is a member of the genus Alteromonas, sharing 97.0-97.4 % 16S rRNA gene sequence similarity with Alteromonas additaR10SW13 T , A. stellipolaris LMG 21861 T , A. naphthalenivorans JCM 17741 T , A. gracilis 9a2 T and A. australica H17 T , and 94.8-96.8 % with the type strains of other species of the genus Alteromonas. Strain IO390401 T contained ubiquinone-8 (Q-8) as the sole isoprenoid quinone, C16:0 and C16:1ω7c/C16:1ω6c as the dominant cellular fatty acids, and phosphatidylglycerol and phosphatidylethanolamine as the major polar lipids. The genome of strain IO390401 T consists of a 4.4 Mb chromosome with a G+C content of 48.2 mol%. Average nucleotide identity values between strain IO390401 T and the three closest phylogenetic neighbours, namely A. additaR10SW13 T , A. stellipolaris LMG 21861 T and A. naphthalenivorans JCM 17741 T , were 70.5, 70.4 and 70.6 %, respectively, and the corresponding in silico DNA-DNA hybridization values were 20.6, 20.7 and 21.1 %. Phylogenetic distinctiveness and chemotaxonomic differences, together with phenotypic properties determined in this study, revealed that strain IO390401 T could be differentiated from closely related species. It is therefore proposed as representing a novel species in the genus Alteromonas, for which the name Alteromonas indica sp. nov. is suggested. The type strain is IO390401 T (=JCM 32638 T =CGMCC 1.13554 T =CCTCC AB 2018072 T ).