z-logo
open-access-imgOpen Access
Alteromonas indica sp. nov., isolated from surface seawater from the Indian Ocean
Author(s) -
Danqiu Lin,
Yong Chen,
Sidong Zhu,
Jifang Yang,
Jigang Chen
Publication year - 2018
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.003078
Subject(s) - alteromonas , biology , 16s ribosomal rna , phylogenetic tree , strain (injury) , genus , botany , phylogenetics , bacteria , microbiology and biotechnology , gene , genetics , anatomy
A Gram-stain-negative bacterium, designated strain IO390401 T , was isolated from a seawater sample from the sulphide region of the Indian Ocean. Phylogenetic trees based on 16S rRNA gene sequences showed that strain IO390401 T is a member of the genus Alteromonas, sharing 97.0-97.4 % 16S rRNA gene sequence similarity with Alteromonas additaR10SW13 T , A. stellipolaris LMG 21861 T , A. naphthalenivorans JCM 17741 T , A. gracilis 9a2 T and A. australica H17 T , and 94.8-96.8 % with the type strains of other species of the genus Alteromonas. Strain IO390401 T contained ubiquinone-8 (Q-8) as the sole isoprenoid quinone, C16:0 and C16:1ω7c/C16:1ω6c as the dominant cellular fatty acids, and phosphatidylglycerol and phosphatidylethanolamine as the major polar lipids. The genome of strain IO390401 T consists of a 4.4 Mb chromosome with a G+C content of 48.2 mol%. Average nucleotide identity values between strain IO390401 T and the three closest phylogenetic neighbours, namely A. additaR10SW13 T , A. stellipolaris LMG 21861 T and A. naphthalenivorans JCM 17741 T , were 70.5, 70.4 and 70.6 %, respectively, and the corresponding in silico DNA-DNA hybridization values were 20.6, 20.7 and 21.1 %. Phylogenetic distinctiveness and chemotaxonomic differences, together with phenotypic properties determined in this study, revealed that strain IO390401 T could be differentiated from closely related species. It is therefore proposed as representing a novel species in the genus Alteromonas, for which the name Alteromonas indica sp. nov. is suggested. The type strain is IO390401 T (=JCM 32638 T =CGMCC 1.13554 T =CCTCC AB 2018072 T ).

The content you want is available to Zendy users.

Already have an account? Click here to sign in.
Having issues? You can contact us here
Accelerating Research

Address

John Eccles House
Robert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom