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Salinimonas sediminis sp. nov., a piezophilic bacterium isolated from a deep-sea sediment sample from the New Britain Trench
Author(s) -
Junwei Cao,
Qiliang Lai,
Ping Liu,
Yuli Wei,
Li Wang,
Rulong Liu,
Jiasong Fang
Publication year - 2018
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.003055
Subject(s) - biology , 16s ribosomal rna , alteromonas , phylogenetic tree , genomic dna , strain (injury) , microbiology and biotechnology , genus , ribosomal rna , bacteria , botany , gene , genetics , anatomy
A cold-adapted, piezophilic, slightly halophilic bacterium, designated as N102 T , was isolated from a deep-sea (4700 m) sediment sample collected from the New Britain Trench. Strain N102 T was Gram-stain-negative, rod-shaped, oxidase- and catalase-positive, and grew optimally at 28 °C (range, 4-40 °C), pH 7.0-7.5 (range, 6.0-9.0) and 3-4 %(w/v) NaCl (range, 2-15 %). The optimum pressure for growth was 10 MPa with tolerance up to 70 MPa. 16S rRNA gene sequence analysis showed that strain N102 T was most closely related to Alteromonas addita R10SW13 T (97.2 %), Alteromonas stellipolaris LMG 21861 T (97.1 %), Alteromonas gracilis 9a2 T (97.1 %), Salinimonas lutimaris DPSR-4 T (96.1 %) and Salinimonas chungwhensis BH030046 T (95.4 %). Phylogenetic analyses based on 16S rRNA gene, gyrB gene and whole-genome sequences placed strain N102 T within the genus Salinimonas. Genomic comparisons based on average nucleotide identity and tetranucleotide signature frequencies corroborated the results of the phylogenetic analyses. The principal fatty acids were summed feature 3 (C16 : 1ω7c/C16 : 1ω6c), C16 : 0 and summed feature 8 (C18 : 1ω7c/C18 : 1ω6c). The major respiratory quinone was ubiquinone 8. The predominant polar lipids were phosphatidylethanolamine, phosphatidylglycerol and an unidentified phospholipid. The G+C content of the genomic DNA was 48.2 mol%. On the basis of phenotypic, chemotaxonomic and molecular data, we conclude that strain N102 T represents a novel species of the genus Salinimonas, for which the name Salinimonassediminis sp. nov. is proposed (type strain N102 T =MCCC 1K03497 T =KCTC 62440 T ).

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