Open AccessAhniella affigens gen. nov., sp. nov., a gammaproteobacterium isolated from sandy soil near a stream
Author(s) -
Woon Mo Hwang,
Yongseok Ko,
Jae Heon Kim,
Keunsoo Kang
Publication year - 2018
Publication title -
international journal of systematic and evolutionary microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.925
H-Index - 173
eISSN - 1466-5034
pISSN - 1466-5026
DOI - 10.1099/ijsem.0.002859
Subject(s) - biology , 16s ribosomal rna , phylogenetic tree , strain (injury) , genomic dna , botany , phylogenetics , lineage (genetic) , genus , microbiology and biotechnology , bacteria , gene , genetics , anatomy
A bacterial strain, designated D13 T , was isolated from sandy soil near a stream in Sinan-gun, Republic of Korea. Cells were Gram-stain-negative, aerobic, non-motile and flexible rod-shaped. Growth occurred at 15-35 °C (optimum 30 °C) and pH 6.5-8.0 (pH 7.0). NaCl was not obligatory for growth but could be tolerated at up to 0.5 % (w/v) NaCl. The DNA G+C content of the genomic DNA of strain D13 T was 57.7 mol% and a phylogenetic analysis of the 16S rRNA gene sequence revealed that strain D13 T formed a distinct evolutionary lineage within the family Rhodanobacteraceae of the order Lysobacterales. Strain D13 T showed highest 16S rRNA sequence similarity to Lysobacter hankyongensis KTCe-2 T (92.7 %), followed by Luteimonas cucumeris Y4 T (92.7 %), Dyella japonica XD53 T (92.6 %) and Aquimonas voraii GPTSA 20 T (92.5 %). The major cellular fatty acids (>10 % of the total) were iso-C16 : 0, iso-C15 : 0 and summed feature 9 (iso-C17 : 1ω9с and/or C16 : 0 10-methyl). The respiratory quinone was ubiquinone-8 and the major polar lipids of the isolate consisted of phosphatidylethanolamine, diphosphatidylglycerol, phosphatidylglycerol and phosphatidylmonomethylethanolamine. Based on polyphasic analysis, strain D13 T could be differentiated from other genera in the family Rhodanobacteraceae, which suggests that strain D13 T represents a novel species of a new genus in the family Rhodanobacteraceae, for which the name Ahniella affigens gen. nov., sp. nov. is proposed. The type strain is D13 T (=KACC 19270 T =JCM 31634 T ).