Proton NMR studies of manganese ion binding to tRNAderived acceptor arm duplexes
Author(s) -
Gu nther Ott,
Lubosˇ Arnold,
Stefan Limmer
Publication year - 1993
Publication title -
nucleic acids research
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 9.008
H-Index - 537
eISSN - 1362-4954
pISSN - 0305-1048
DOI - 10.1093/nar/21.25.5859
Subject(s) - context (archaeology) , manganese , binding site , wobble base pair , acceptor , metal , ion , nuclear magnetic resonance spectroscopy , crystallography , divalent , metal ions in aqueous solution , biology , rna , stereochemistry , materials science , chemistry , transfer rna , biochemistry , physics , paleontology , organic chemistry , gene , condensed matter physics , metallurgy
Several RNA duplexes corresponding to the acceptor arms of different tRNAs have been analyzed with respect to their divalent metal ion binding capability by means of proton NMR spectroscopy using paramagnetic Mn2+ ions as probes. In particular, the role of GU wobble base pairs has been analyzed with reference to their potential for creating metal ion binding sites. It is shown that both the structural modifications induced by GU pairs in the A-RNA geometry and the sequence context seem to affect the metal ion binding capabilities.
Accelerating Research
Robert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom
Address
John Eccles HouseRobert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom