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Crystal structure of a 12 ANK repeat stack from human ankyrinR
Author(s) -
Michaely Peter,
Tomchick Diana R.,
Machius Mischa,
Anderson Richard G.W.
Publication year - 2002
Publication title -
the embo journal
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 7.484
H-Index - 392
eISSN - 1460-2075
pISSN - 0261-4189
DOI - 10.1093/emboj/cdf651
Subject(s) - biology , stack (abstract data type) , crystal structure , computational biology , crystallography , chemistry , computer science , programming language
Ankyrins are multifunctional adaptors that link specific proteins to the membrane‐associated, spectrin–actin cytoskeleton. The N‐terminal, ‘membrane‐binding’ domain of ankyrins contains 24 ANK repeats and mediates most binding activities. Repeats 13–24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO 3 anion exchanger, voltage‐gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. Here we report the crystal structure of a human ankyrinR construct containing ANK repeats 13–24 and a portion of the spectrin‐binding domain. The ANK repeats are observed to form a contiguous spiral stack with which the spectrin‐binding domain fragment associates as an extended strand. The structural information has been used to construct models of all 24 repeats of the membrane‐binding domain as well as the interactions of the repeats with the Cl/HCO 3 anion exchanger and clathrin. These models, together with available binding studies, suggest that ion transporters such as the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity.