Exome sequencing and network analysis identifies shared mechanisms underlying spinocerebellar ataxia
Author(s) -
Esther Nibbeling,
Anna Duarri,
Corien C. VerschuurenBemelmans,
Michiel R. Fokkens,
Juha Karjalainen,
Cleo J. L. M. Smeets,
Jelkje J. de Boer-Bergsma,
Gerben van der Vries,
Dennis Dooijes,
Giovana Bampi,
Cleo C. van Diemen,
E. R. Brunt,
Elly F. Ippel,
Berry Kremer,
Monique H.M. Vlak,
Noam Adir,
Cisca Wijmenga,
Bart P.C. van de Warrenburg,
Lude Franke,
Richard J. Sinke,
Dineke S. Verbeek
Publication year - 2017
Publication title -
brain
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 5.142
H-Index - 336
eISSN - 1460-2156
pISSN - 0006-8950
DOI - 10.1093/brain/awx251
Subject(s) - spinocerebellar ataxia , exome sequencing , biology , genetics , genetic heterogeneity , exome , ataxia , neuroscience , gene , mutation , phenotype
The autosomal dominant cerebellar ataxias, referred to as spinocerebellar ataxias in genetic nomenclature, are a rare group of progressive neurodegenerative disorders characterized by loss of balance and coordination. Despite the identification of numerous disease genes, a substantial number of cases still remain without a genetic diagnosis. Here, we report five novel spinocerebellar ataxia genes, FAT2, PLD3, KIF26B, EP300, and FAT1, identified through a combination of exome sequencing in genetically undiagnosed families and targeted resequencing of exome candidates in a cohort of singletons. We validated almost all genes genetically, assessed damaging effects of the gene variants in cell models and further consolidated a role for several of these genes in the aetiology of spinocerebellar ataxia through network analysis. Our work links spinocerebellar ataxia to alterations in synaptic transmission and transcription regulation, and identifies these as the main shared mechanisms underlying the genetically diverse spinocerebellar ataxia types.
Accelerating Research
Robert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom
Address
John Eccles HouseRobert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom