Optimizing viral genome subsampling by genetic diversity and temporal distribution (TARDiS) for phylogenetics | Zendy

Simone Marini | Zendy; Carla Mavian | Zendy; Alberto Riva | Zendy; Mattia Prosperi | Zendy; Marco Salemi | Zendy; Brittany Rife Magalis | Zendy

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Optimizing viral genome subsampling by genetic diversity and temporal distribution (TARDiS) for phylogenetics

Author(s) -

Simone Marini,

Carla Mavian,

Alberto Riva,

Mattia Prosperi,

Marco Salemi,

Brittany Rife Magalis

Publication year - 2021

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btab725

Subject(s) - genetic diversity , phylogenetic tree , phylogenetics , evolutionary biology , diversity (politics) , distribution (mathematics) , genome , biology , computational biology , genetics , mathematics , gene , medicine , mathematical analysis , population , environmental health , sociology , anthropology

TARDiS is a novel phylogenetic tool for optimal genetic subsampling. It optimizes both genetic diversity and temporal distribution through a genetic algorithm.

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