Open AccessOptimizing viral genome subsampling by genetic diversity and temporal distribution (TARDiS) for phylogenetics
Author(s) -
Simone Marini,
Carla Mavian,
Alberto Riva,
Mattia Prosperi,
Marco Salemi,
Brittany Rife Magalis
Publication year - 2021
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btab725
Subject(s) - genetic diversity , phylogenetic tree , phylogenetics , diversity (politics) , genome , distribution (mathematics) , evolutionary biology , biology , genetics , mathematics , gene , medicine , mathematical analysis , population , environmental health , sociology , anthropology
TARDiS is a novel phylogenetic tool for optimal genetic subsampling. It optimizes both genetic diversity and temporal distribution through a genetic algorithm.