Open AccessCatalytically Enhanced Cas9 Through Directed Protein Evolution
Author(s) -
Travis H. Hand,
Mitchell O. Roth,
Chardasia L. Smith,
Emily Shiel,
Kyle N. Klein,
David M. Gilbert,
Hong Li
Publication year - 2021
Publication title -
the crispr journal
Language(s) - English
Resource type - Journals
eISSN - 2573-1602
pISSN - 2573-1599
DOI - 10.1089/crispr.2020.0092
Subject(s) - crispr , cas9 , gene , streptococcus pyogenes , biology , directed evolution , computational biology , protein engineering , genome editing , homology (biology) , enzyme , genetics , biochemistry , bacteria , mutant , staphylococcus aureus
Guided by the extensive knowledge of CRISPR-Cas9 molecular mechanisms, protein engineering can be an effective method in improving CRISPR-Cas9 toward desired traits different from those of their natural forms. Here, we describe a directed protein evolution method that enables selection of catalytically enhanced CRISPR-Cas9 variants (CECas9) by targeting a shortened protospacer within a toxic gene. We demonstrate the effectiveness of this method with a previously characterized Type II-C Cas9 from Acidothermus cellulolyticus (AceCas9) and show by enzyme kinetics an up to fourfold improvement of the in vitro catalytic efficiency by AceCECas9. We further evolved the more widely used Streptococcus pyogenes Cas9 (SpyCas9) and demonstrated a noticeable improvement in the SpyCECas9-facilitated homology directed repair-based gene insertion in human colon cancer cells.