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Analysis of genetic variability of South American wild rice populations ( Oryza glumaepatula ) with isozymes and RAPD markers
Author(s) -
BUSO G. S. C.,
RANGEL P. H.,
FERREIRA M. E.
Publication year - 1998
Publication title -
molecular ecology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 2.619
H-Index - 225
eISSN - 1365-294X
pISSN - 0962-1083
DOI - 10.1046/j.1365-294x.1998.00321.x
Subject(s) - biology , rapd , genetic diversity , analysis of molecular variance , genetic variation , inbreeding , population , genetic variability , genetic divergence , oryza , oryza sativa , ecology , genetic structure , evolutionary biology , genetics , genotype , demography , gene , sociology
The knowledge of population structure and genetic diversity of wild relatives of rice is needed to investigate their evolutionary history and potential use in breeding programs. Very little is known about the wild rice species ( Oryza spp.), particularly those that are native to South America. A study using isozyme and RAPD markers was conducted to estimate the level of genetic diversity of four South American wild rice populations ( Oryza glumaepatula ) recently collected in the Amazon forest and western Brazil rivers. F ‐statistics and genetic diversity parameters calculated from isozyme and RAPD markers indicated high values for inbreeding coefficients and differentiation among the four populations. In agreement with this, a pattern of greater variation between than within populations was observed with both types of markers. These findings were corroborated by an AMOVA analysis, which indicated that a large portion of the total genetic variation was attributed to regional divergence. The partition of the AMOVA analysis among populations showed that most of the genetic diversity was due to differences among populations. This distribution pattern of genetic variation of O. glumaepatula populations is in agreement with the expectation for an autogamous species and provides important baseline data for conservation and collection strategies for this species.