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Dynamics extracted from fixed cells reveal feedback linking cell growth to cell cycle
Author(s) -
Ran Kafri,
Jason Levy,
Miriam B. Ginzberg,
Seungeun Oh,
Galit Lahav,
Marc W. Kirschner
Publication year - 2013
Publication title -
nature
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 15.993
H-Index - 1226
eISSN - 1476-4687
pISSN - 0028-0836
DOI - 10.1038/nature11897
Subject(s) - ergodic theory , cell size , feature (linguistics) , dynamics (music) , biological system , steady state (chemistry) , cell , growth rate , variation (astronomy) , statistical physics , computer science , cell cycle , biology , mathematics , microbiology and biotechnology , physics , chemistry , genetics , mathematical analysis , geometry , acoustics , linguistics , philosophy , astrophysics
Biologists have long been concerned about what constrains variation in cell size, but progress in this field has been slow and stymied by experimental limitations. Here we describe a new method, ergodic rate analysis (ERA), that uses single-cell measurements of fixed steady-state populations to accurately infer the rates of molecular events, including rates of cell growth. ERA exploits the fact that the number of cells in a particular state is related to the average transit time through that state. With this method, it is possible to calculate full time trajectories of any feature that can be labelled in fixed cells, for example levels of phosphoproteins or total cellular mass. Using ERA we find evidence for a size-discriminatory process at the G1/S transition that acts to decrease cell-to-cell size variation.

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