Open AccessSynthesis, Structural Investigation, Hirshfeld Surface Analysis, and Biological Evaluation of N-(3-Cyanothiophen-2-yl)-2-(thiophen-2-yl)acetamide
Author(s) -
Şükriye Çakmak,
Sevgi Kansız,
Mohammad Azam,
Cem Cüneyt Ersanlı,
Önder İdil,
Aysel Veyisoğlu,
Hasan Yakan,
Halil Kütük,
Arunabhiram Chutia
Publication year - 2022
Publication title -
acs omega
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.779
H-Index - 40
ISSN - 2470-1343
DOI - 10.1021/acsomega.2c00318
Subject(s) - chemistry , acetamide , density functional theory , hydrogen bond , stereochemistry , molecule , proton nmr , amide , crystallography , organic chemistry , computational chemistry
In this study, a novel heterocyclic amide derivative, N -(3-cyanothiophen-2-yl)-2-(thiophen-2-yl)acetamide ( I ), was obtained by reacting 2-aminothiophene-3-carbonitrile with activated 2-(thiophen-2-yl)acetic acid in a N -acylation reaction and characterized by elemental analyses, FT-IR, 1 H and 13 C NMR spectroscopic studies, and single crystal X-ray crystallography. The crystal packing of I is stabilized by C-H···N and N-H···N hydrogen bonds. In addition, I was investigated computationally using the density functional theory (DFT) method with the B3LYP exchange and correlation functions in conjunction with the 6311++G(d,p) basis set in the gas phase. Fukui function (FF) analysis was also carried out. Electrophilicity-based charge transfer (ECT) method and charge transfer (Δ N ) were computed to examine the interactions between I and DNA bases (such as guanine, thymine, adenine, and cytosine). The most important contributions to the Hirshfeld surface are H···H (21%), C···H (20%), S···H (19%), N···H (14%), and O···H (12%). An ABTS antioxidant assay was used to evaluate the in vitro antioxidant activity of I . The compound exhibited moderate antioxidant activity. The antimicrobial activity of the title molecule was investigated under aseptic conditions, using the microdilution method, against Gram-positive and Gram-negative bacterial strains, and it also demonstrated significant activity against yeasts ( Candida glabrata ATCC 90030, Candida krusei ATCC 34135). The findings revealed that the molecule possesses significant antioxidant and antimicrobial properties.