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The distribution of T‐DNA in the genomes of transgenic Arabidopsis and rice
Author(s) -
Barakat Abdelali,
Gallois Patrick,
Raynal Monique,
Mestre-Ortega Dominique,
Sallaud Christophe,
Guiderdoni Emmanuel,
Delseny Michel,
Bernardi Giorgio
Publication year - 2000
Publication title -
febs letters
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.593
H-Index - 257
eISSN - 1873-3468
pISSN - 0014-5793
DOI - 10.1016/s0014-5793(00)01393-4
Subject(s) - arabidopsis , genome , gene , biology , arabidopsis thaliana , genetics , dna , mutant
Almost all the nuclear genes of four Gramineae (maize, wheat, barley, rice) and pea are located in DNA fractions covering only a 1–2% GC range and representing between 10 and 25% of the different genomes. These DNA fractions comprise large gene‐rich regions (collectively called the ‘gene space’) separated by vast gene‐empty, repeated sequences. In contrast, in Arabidopsis thaliana , genes are distributed in DNA fractions covering an 8% GC range and representing 85% of the genome. Here, we investigated the integration of a transferred DNA (T‐DNA) in the genomes of Arabidopsis and rice and found different patterns of integration, which are correlated with the different gene distributions. While T‐DNA integrates essentially everywhere in the Arabidopsis genome, integration was detected only in the gene space, namely in the gene‐rich, transcriptionally active, regions of the rice genome. The implications of these results for the integration of foreign DNA are discussed.