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Exploring potassium‐dependent GTP hydrolysis in TEES family GTPases
Author(s) -
Rafay Abu,
Majumdar Soneya,
Prakash Balaji
Publication year - 2012
Publication title -
febs open bio
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.718
H-Index - 31
ISSN - 2211-5463
DOI - 10.1016/j.fob.2012.07.008
Subject(s) - gtpase , gtp' , dynamin , hydrolysis , microbiology and biotechnology , biochemistry , chemistry , biophysics , biology , enzyme , endocytosis , cell
GTPases are important regulatory proteins that hydrolyze GTP to GDP. A novel GTP‐hydrolysis mechanism is employed by MnmE, YqeH and FeoB, where a potassium ion plays a role analogous to the Arginine finger of the Ras‐RasGAP system, to accelerate otherwise slow GTP hydrolysis rates. In these proteins, two conserved asparagines and a ‘K‐loop’ present in switch‐I, were suggested as attributes of GTPases employing a K + ‐mediated mechanism. Based on their conservation, a similar mechanism was suggested for TEES family GTPases. Recently, in Dynamin, Fzo1 and RbgA, which also conserve these attributes, a similar mechanism was shown to be operative. Here, we probe K + ‐activated GTP hydrolysis in TEES (TrmE‐Era‐EngA‐YihA‐Septin) GTPases – Era, EngB and the two contiguous G‐domains, GD1 and GD2 of YphC (EngA homologue) – and also in HflX, another GTPase that also conserves the same attributes. While GD1‐YphC and Era exhibit a K + ‐mediated activation of GTP hydrolysis, surprisingly GD2‐YphC, EngB and HflX do not. Therefore, the attributes identified thus far, do not necessarily predict a K + ‐mechanism in GTPases and hence warrant extensive structural investigations.

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