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Mutations in the SARS-CoV-2 spike RBD are responsible for stronger ACE2 binding and poor anti-SARS-CoV mAbs cross-neutralization
Author(s) -
Masaud Shah,
Bilal Ahmad,
Sangdun Choi,
Hyun Goo Woo
Publication year - 2020
Publication title -
computational and structural biotechnology journal
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.908
H-Index - 45
ISSN - 2001-0370
DOI - 10.1016/j.csbj.2020.11.002
Subject(s) - neutralization , infectivity , coronavirus , virology , covid-19 , monoclonal antibody , epitope , glycoprotein , mutation , plasma protein binding , binding site , biology , antibody , virus , chemistry , microbiology and biotechnology , gene , genetics , medicine , biochemistry , disease , pathology , infectious disease (medical specialty)
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), which causes coronavirus disease 2019 (COVID-19), is a novel beta coronavirus. SARS-CoV-2 uses spike glycoprotein to interact with host angiotensin-converting enzyme 2 (ACE2) and ensure cell recognition. High infectivity of SARS-CoV-2 raises questions on spike-ACE2 binding affinity and its neutralization by anti-SARS-CoV monoclonal antibodies (mAbs). Here, we observed Val-to-Lys417 mutation in the receptor-binding domains (RBD) of SARS-CoV-2, which established a Lys-Asp electrostatic interaction enhancing its ACE2-binding. Pro-to-Ala475 substitution and Gly482 insertion in the A GSTPCN G V-loop of RBD possibly hinders neutralization of SARS-CoV-2 by anti-SARS-CoV mAbs. In addition, we identified unique and structurally conserved conformational-epitopes on RBDs, which can be potential therapeutic targets. Collectively, we provide new insights into the mechanisms underlying the high infectivity of SARS-CoV-2 and development of effective neutralizing agents.

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