An HPF1/PARP1-Based Chemical Biology Strategy for Exploring ADP-Ribosylation
Author(s) -
Juán José Bonfiglio,
Orsolya Leidecker,
Helen Dauben,
Edoardo José Longarini,
Thomas Colby,
Pablo San SegundoAcosta,
Kathryn Perez,
Ivan Matić
Publication year - 2020
Publication title -
cell
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 26.304
H-Index - 776
eISSN - 1097-4172
pISSN - 0092-8674
DOI - 10.1016/j.cell.2020.09.055
Subject(s) - biology , adp ribosylation , computational biology , recombinant dna , proteomics , dna damage , microbiology and biotechnology , dna , biochemistry , enzyme , nad+ kinase , gene
Strategies for installing authentic ADP-ribosylation (ADPr) at desired positions are fundamental for creating the tools needed to explore this elusive post-translational modification (PTM) in essential cellular processes. Here, we describe a phospho-guided chemoenzymatic approach based on the Ser-ADPr writer complex for rapid, scalable preparation of a panel of pure, precisely modified peptides. Integrating this methodology with phage display technology, we have developed site-specific as well as broad-specificity antibodies to mono-ADPr. These recombinant antibodies have been selected and characterized using multiple ADP-ribosylated peptides and tested by immunoblotting and immunofluorescence for their ability to detect physiological ADPr events. Mono-ADPr proteomics and poly-to-mono comparisons at the modification site level have revealed the prevalence of mono-ADPr upon DNA damage and illustrated its dependence on PARG and ARH3. These and future tools created on our versatile chemical biology-recombinant antibody platform have broad potential to elucidate ADPr signaling pathways in health and disease.
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