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H-cluster assembly intermediates built on HydF by the radical SAM enzymes HydE and HydG
Author(s) -
Amanda S. Byer,
Eric M. Shepard,
Michael W. Ratzloff,
Jeremiah N. Betz,
Paul W. King,
William E. Broderick,
Joan Broderick
Publication year - 2019
Publication title -
jbic journal of biological inorganic chemistry
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.802
H-Index - 101
eISSN - 1432-1327
pISSN - 0949-8257
DOI - 10.1007/s00775-019-01709-7
Subject(s) - chemistry , hydrogenase , iron–sulfur cluster , enzyme , ligand (biochemistry) , electron paramagnetic resonance , stereochemistry , cluster (spacecraft) , metalloprotein , biosynthesis , active site , biochemistry , receptor , physics , nuclear magnetic resonance , computer science , programming language
[FeFe]-hydrogenase catalyzes the reversible reduction of protons to H 2 at a complex metallocofactor site, the H-cluster. Biosynthesis of this active-site H-cluster requires three maturation enzymes: the radical S-adenosylmethionine enzymes HydE and HydG synthesize the nonprotein ligands, while the GTPase HydF provides a scaffold for assembly of the 2Fe subcluster of the H-cluster ([2Fe] H ) prior to its transfer to hydrogenase. To delineate the assembly and delivery steps for the 2Fe precursor cluster coordinated to HydF ([2Fe] F ), we have heterologously expressed HydF in the presence of HydE alone (HydF E ) or HydG alone (HydF G ), and characterized the resulting purified HydF E and HydF G using UV-visible, EPR, and FTIR spectroscopies and biochemical assays. The iron-sulfur clusters on HydF are modified by co-expression with HydE or HydG, as evidenced by the changes in the visible, EPR, and FTIR spectral features. Further, biochemical assays show that HydF E is capable of activating HydA ΔEFG o a limited extent (~ 1% of WT) even though the normal source of CO and CN - ligands of [2Fe] H (HydG) was absent. Activation assays performed with HydF G , in contrast, exhibit no ability to mature HydA ΔEFG . It appears that in the case of HydF E , trace diatomics from the cellular environment are incorporated into a [2Fe] F -like precursor on HydF in the absence of HydG. We conclude that the product of HydE, presumably the dithiomethylamine ligand of [2Fe] H , is absolutely essential to the activation process, while the diatomic products of HydG can be provided from alternate sources.

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