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Non-contiguous-Finished Genome Sequence and Description of Paenibacillus camerounensis sp. nov.
Author(s) -
Mamadou Keita,
Roshan Padhmananabhan,
Aurélia Caputo,
Catherine Robert,
Éric Delaporte,
Didier Raoult,
PierreEdouard Fournier,
Fadi Bittar
Publication year - 2015
Publication title -
microbial ecology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.161
H-Index - 128
eISSN - 1432-184X
pISSN - 0095-3628
DOI - 10.1007/s00248-015-0722-4
Subject(s) - biology , genome , genetics , whole genome sequencing , gene , paenibacillus , genome size , gorilla , ribosomal rna , 16s ribosomal rna , strain (injury) , paleontology , anatomy
Strain G4(T) was isolated from the stool sample of a wild gorilla (Gorilla gorilla gorilla) from Cameroon. It is a facultative anaerobic, Gram-negative, rod-shaped bacterium. This strain exhibits a 16S rRNA nucleotide sequence similarity of 97.48% with Paenibacillus typhae, the phylogenetically closest species with standing nomenclature. Moreover, the strain G4(T) presents some phenotypic differences when compared to other Paenibacillus species and shows a low MALDI-TOF Mass Spectrometry score that does not allow any identification. Thus, it is likely that this strain represents a new species. Here, we describe the characteristics of this organism, complete genome sequence, and annotation. The 6,933,847 bp size genome (1 chromosome but no plasmid) contains 5972 protein-coding genes and 54 RNAs genes, including 44 tRNA genes. In addition, digital DNA-DNA hybridization values for the genome of the strain G4(T) against the closest Paenibacillus genomes range between 19.7 and 22.1, once again confirming its new status as a new species. On the basis of these polyphasic data, consisting of phenotypic and genomic analyses, we propose the creation of Paenibacillus camerounensis sp. nov. that contains the strain G4(T).

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