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Study of conformational and optical rotation for the alaninamide
Author(s) -
Zhao Shulei,
Zhou Zhengyu,
Wang Wenjuan,
Ma Hongkun
Publication year - 2006
Publication title -
international journal of quantum chemistry
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.484
H-Index - 105
eISSN - 1097-461X
pISSN - 0020-7608
DOI - 10.1002/qua.21219
Subject(s) - polarizable continuum model , basis set , polarizability , intramolecular force , conformational isomerism , basis (linear algebra) , chemistry , aqueous solution , hydrogen bond , computational chemistry , computation , density functional theory , potential energy surface , optical rotation , molecular physics , molecule , solvent , solvent effects , mathematics , geometry , algorithm , stereochemistry , organic chemistry
Six stationary points of alaninamide have been located on the potential surface energy (PES) at the B3LYP/6‐311++G( 2d,2p ) level of theory both in the gas phase and in aqueous solution. In the aqueous solution, to take the water solvent effect into account, the polarizable continuum model (PCM) method has been used. Accurate geometric structures and their relative stabilities have been investigated. The results show that the intramolecular hydrogen bond plays a very important role in stabilizing the global minimum of the alaninamide. Moreover, the consistent result in relative energy using high‐level computations, including the MP2 and MP3 methods with the same basis set [6‐311++G( 2d,2p )], indicates that the B3LYP/6‐311++G( d,p ) level may be applied to the analogue system. More importantly, the optical rotation of the optimized conformers (both in the gas phase and in aqueous solution) of alaninamide have been calculated using the density functional theory (DFT) and Hartree–Fock (HF) method at various basis sets (6‐31+G*, 6‐311++G( d,p ), 6‐311++G( 2d,2p ) and aug‐cc‐pvdz). The results show that the selection of the computation method and the basis set in calculation has great influence on the results of the optical rotations. The reliability of the HF method is less than that of DFT, and selecting the basis set of 6‐311++G( 2d,2p ) and aug‐cc‐pvDZ produces relative reliable results. Analysis of the computational results of the structure parameters and the optical rotations yields the conclusion that just the helixes in molecules caused the chiral molecules to be optical active. The Boltzmann equilibrium distributions for the six conformers (both in the gas phase and in the aqueous solution) are also carried out. © 2006 Wiley Periodicals, Inc. Int J Quantum Chem, 2007