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Synthesis and conformational investigation of cyclic dipeptides: 7‐membered rings containing α‐ and β‐amino acids
Author(s) -
MüllerHartwieg J. Constanze D.,
Akyel Kayhan G.,
Zimmermann Jürg
Publication year - 2003
Publication title -
journal of peptide science
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.475
H-Index - 66
eISSN - 1099-1387
pISSN - 1075-2617
DOI - 10.1002/psc.445
Subject(s) - dipeptide , chemistry , linker , solid phase synthesis , molecule , cyclic peptide , amino acid , stereochemistry , chemical synthesis , proton nmr , peptide synthesis , combinatorial chemistry , peptide , organic chemistry , biochemistry , computer science , in vitro , operating system
The synthesis of heterocyclic compounds containing the 7‐membered ring system [1,4]diazepane‐2,5‐dione is described. The aim of this study was to elaborate the solid phase and solution synthesis of eight representatives of the cyclic scaffold and to investigate their chemical stability and their conformational properties. The solid phase synthesis was performed on aminomethyl polystyrene resin using 5‐(4‐formyl‐3,5‐dimethoxyphenoxy)valeric acid as a backbone linker system (BAL‐linker). After attachment of the α‐ and β‐amino acid and deprotection of the amino function, the dipeptide ester was obtained. The molecule was cyclized on the solid support by treatment with NaOMe in MeOH/NMP. The product was cleaved from the resin by TFA. For the solution pathway the linear dipeptides were synthesized by coupling of the BOC‐protected L ‐α‐amino acid with the β 2 ‐amino acid ester (EDC/HOBT). After N ‐ and C ‐terminal deprotection of the dipeptide, the linear species was cyclized with EDC/HOBT at a concentration of 3 m M in DMF. The products showed high chemical stability after storage in DMSO at room temperature for weeks. The x‐ray and two dimensional NMR investigations were performed to investigate the conformation of the molecules. Three types of configuration could be distinguished by NMR, depending on the substitution pattern of the cyclic compounds. The x‐ray results confirmed the NMR observations. In general the 7‐membered rings showed rigidity, thus they could represent optimal scaffolds for new receptor ligands. Copyright © 2003 European Peptide Society and John Wiley & Sons, Ltd.