MQAPsingle: A quasi single‐model approach for estimation of the quality of individual protein structure models | Zendy

Pawlowski Marcin | Zendy; Kozlowski Lukasz | Zendy; Kloczkowski Andrzej | Zendy

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MQAPsingle: A quasi single‐model approach for estimation of the quality of individual protein structure models

Author(s) -

Pawlowski Marcin,

Kozlowski Lukasz,

Kloczkowski Andrzej

Publication year - 2016

Publication title -

proteins: structure, function, and bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 1.699

H-Index - 191

eISSN - 1097-0134

pISSN - 0887-3585

DOI - 10.1002/prot.24787

Subject(s) - ranking (information retrieval) , computer science , quality (philosophy) , estimation , cluster analysis , data mining , artificial intelligence , engineering , philosophy , systems engineering , epistemology

We present a Model Quality Assessment Program (MQAP), called MQAPsingle, for ranking and assessing the absolute global quality of single protein models. MQAPsingle is quasi single‐model MQAP, a method that combines advantages of both “pure” single‐model MQAPs and clustering MQAPs. This approach results in higher accuracy compared to the state‐of‐the‐art single‐model MQAPs. Notably, the prediction for a given model is the same regardless if this model is submitted to our server alone or together with other models. Proteins 2016; 84:1021–1028. © 2015 Wiley Periodicals, Inc.

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