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Protein structure prediction center in CASP8
Author(s) -
Kryshtafovych Andriy,
Krysko Oleh,
Daniluk Pawel,
Dmytriv Zinovii,
Fidelis Krzysztof
Publication year - 2009
Publication title -
proteins: structure, function, and bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.699
H-Index - 191
eISSN - 1097-0134
pISSN - 0887-3585
DOI - 10.1002/prot.22517
Subject(s) - casp , protein structure prediction , computer science , selection (genetic algorithm) , data mining , protein structure , artificial intelligence , biology , biochemistry
Abstract We present an outline of the Critical Assessment of Protein Structure Prediction (CASP) infrastructure implemented at the University of California, Davis, Protein Structure Prediction Center. The infrastructure supports selection and validation of prediction targets, collection of predictions, standard evaluation of submitted predictions, and presentation of results. The Center also supports information exchange relating to CASP experiments and structure prediction in general. Technical aspects of conducting the CASP8 experiment and relevant statistics are also provided. Proteins 2009. © 2009 Wiley‐Liss, Inc.