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Structure and stability of the P93G variant of ribonuclease A
Author(s) -
Schultz L. Wayne,
Hargraves Steven R.,
Klink Tony A.,
Raines Ronald T.
Publication year - 1998
Publication title -
protein science
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.353
H-Index - 175
eISSN - 1469-896X
pISSN - 0961-8368
DOI - 10.1002/pro.5560070716
Subject(s) - bovine pancreatic ribonuclease , chemistry , protein folding , rnase p , crystallography , residue (chemistry) , circular dichroism , ribonuclease , thermal stability , protein structure , hydrogen bond , differential scanning calorimetry , stereochemistry , biochemistry , molecule , rna , organic chemistry , physics , gene , thermodynamics
The peptide bonds preceding Pro 93 and Pro 114 of bovine pancreatic ribonuclease A (RNase A) are in the cis conformation. The trans‐to‐cis isomerization of these bonds had been indicted as the slow step during protein folding. Here, site‐directed mutagenesis was used to replace Pro 93 or Pro 114 with a glycine residue, and the crystalline structure of the P93G variant was determined by X‐ray diffraction analysis to a resolution of 1.7 Å. This structure is essentially identical to that of the wild‐type protein, except for the 91‐94 β‐turn containing the substitution. In the wild‐type protein, the β‐turn is of type V1a. In the P93G variant, this turn is of type II with the peptide bond preceding Gly 93 being trans . The thermal stabilities of the P93G and P1 14G variants were assessed by differential scanning calorimetry and thermal denaturation experiments monitored by ultraviolet spectroscopy. The value of ΔΔG m , which reports on the stability lost in the variants, is 1.5‐fold greater for the P114G variant than for the P93G variant. The greater stability of the P93G variant is likely due to the relatively facile accommodation of residues 91‐94 in a type II turn, which has a preference for a glycine residue in its i + 2 position.