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Toward ab initio potential energy surface for paclitaxel: a baccatin III conformational study
Author(s) -
Janicki Maciej,
Lozynski Marek
Publication year - 2017
Publication title -
journal of physical organic chemistry
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.325
H-Index - 66
eISSN - 1099-1395
pISSN - 0894-3230
DOI - 10.1002/poc.3598
Subject(s) - conformational isomerism , chemistry , intramolecular force , polarizable continuum model , computational chemistry , ab initio , hydrogen bond , molecule , polarizability , solvent effects , basis set , potential energy surface , density functional theory , stereochemistry , solvent , organic chemistry
The ab initio conformational energy profile of baccatin III, the diterpene part of paclitaxel, a natural, taxoid anticancer agent, has been investigated using medium‐size basis sets including an electron correlation method (MP2/DFT). By exploiting the internal coordinates using random search methods, 39 conformers of baccatin III were found. The most stable conformer, competing with its 13‐C rotamers, was shown to have three intramolecular hydrogen bonds of 1, 7 and 13 hydroxyls to the carbonyl oxygen atoms of 2‐benzoate and 10‐ and 4‐acetate ester groups, respectively. The results of the polarizable continuum model (PCM) used to account for the dielectric effect of the environment show that in water, the delicate balances between intramolecular hydrogen bridges and general conformational preferences are conserved, at least in the absence of explicit solvent molecules. Copyright © 2016 John Wiley & Sons, Ltd.