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The Unipept metaproteomics analysis pipeline
Author(s) -
Mesuere Bart,
Debyser Griet,
Aerts Maarten,
Devreese Bart,
Vandamme Peter,
Dawyndt Peter
Publication year - 2015
Publication title -
proteomics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.26
H-Index - 167
eISSN - 1615-9861
pISSN - 1615-9853
DOI - 10.1002/pmic.201400361
Subject(s) - interface (matter) , computer science , license , pipeline (software) , application programming interface , database , world wide web , metaproteomics , user interface , software engineering , operating system , metagenomics , chemistry , biochemistry , bubble , maximum bubble pressure method , gene
Unipept (http://unipept.ugent.be) is a web application that offers a user-friendly way to explore the biodiversity of complex metaproteome samples by providing interactive visualizations. In this article, the updates and changes to Unipept since its initial release are presented. This includes the addition of interactive sunburst and treeview visualizations to the multipeptide analysis, the foundations of an application programming interface (API) and a command line interface, updated data sources, and the open-sourcing of the entire application under the MIT license.