IQuant: An automated pipeline for quantitative proteomics based upon isobaric tags | Zendy

Wen Bo | Zendy; Zhou Ruo | Zendy; Feng Qiang | Zendy; Wang Quanhui | Zendy; Wang Jun | Zendy; Liu Siqi | Zendy

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IQuant: An automated pipeline for quantitative proteomics based upon isobaric tags

Author(s) -

Wen Bo,

Zhou Ruo,

Feng Qiang,

Wang Quanhui,

Wang Jun,

Liu Siqi

Publication year - 2014

Publication title -

proteomics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 1.26

H-Index - 167

eISSN - 1615-9861

pISSN - 1615-9853

DOI - 10.1002/pmic.201300361

Subject(s) - isobaric process , pipeline (software) , computer science , software , isobaric labeling , proteomics , quantitative proteomics , interface (matter) , process (computing) , identification (biology) , software engineering , data mining , operating system , chemistry , biology , biochemistry , physics , botany , bubble , maximum bubble pressure method , gene , thermodynamics

Quantitative proteomics technology based on isobaric tags is playing an important role in proteomic investigation. In this paper, we present an automated software, named IQuant, which integrates a postprocessing tool of protein identification and advanced statistical algorithms to process the MS/MS signals generated from the peptides labeled by isobaric tags and aims at proteomics quantification. The software of IQuant, which is freely downloaded at http://sourceforge.net/projects/iquant/, can run from a graphical user interface and a command-line interface, and can work on both Windows and Linux systems.

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