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Pathway Palette: A rich internet application for peptide‐, protein‐ and network‐oriented analysis of MS data
Author(s) -
Askenazi Manor,
Li Shaojuan,
Singh Saurav,
Marto Jarrod A.
Publication year - 2010
Publication title -
proteomics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.26
H-Index - 167
eISSN - 1615-9861
pISSN - 1615-9853
DOI - 10.1002/pmic.200900723
Subject(s) - proteomics , leverage (statistics) , computer science , the internet , palette (painting) , computational biology , quantitative proteomics , biology , world wide web , artificial intelligence , biochemistry , gene , operating system
Recent improvements in proteomic technologies have collectively yielded data sets that far exceed the capabilities of typical low-throughput interpretation strategies. Unfortunately, tools designed to leverage the "peptide-centric" content of MS-based proteomics lag the current rate of data production. Here, we describe Pathway Palette (http://blaispathways.dfci.harvard.edu), a freely accessible internet application that enables researchers to easily transition from peptides to biological pathways, while simultaneously retaining the qualitative and quantitative aspects of the underlying MS data.