FragmentationAnalyzer: An open‐source tool to analyze MS/MS fragmentation data | Zendy

Barsnes Harald | Zendy; Eidhammer Ingvar | Zendy; Martens Lennart | Zendy

AI Assistant Blog Pricing

Home ZAIA Blog

Premium

FragmentationAnalyzer: An open‐source tool to analyze MS/MS fragmentation data

Author(s) -

Barsnes Harald,

Eidhammer Ingvar,

Martens Lennart

Publication year - 2010

Publication title -

proteomics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 1.26

H-Index - 167

eISSN - 1615-9861

pISSN - 1615-9853

DOI - 10.1002/pmic.200900681

Subject(s) - fragmentation (computing) , open source , computer science , data mining , computational biology , chemistry , biology , operating system , software

A thorough understanding of the fragmentation processes in MS/MS can be a powerful tool in assessing the resulting peptide and protein identifications. We here present the freely available, open-source FragmentationAnalyzer tool (http://fragmentation-analyzer.googlecode.com) that makes it straightforward to analyze large MS/MS data sets for specific types of identified peptides, using a common set of peptide properties. This enables the detection of fragmentation pattern nuances related to specific instruments or due to the presence of post-translational modifications.

This content is not available in your region!

Continue researching here.

Having issues? You can contact us here

Accelerating Research