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OMSSAGUI: An open‐source user interface component to configure and run the OMSSA search engine
Author(s) -
Tharakan Ravi,
Martens Lennart,
Van Eyk Jennifer E.,
Graham David R.
Publication year - 2008
Publication title -
proteomics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.26
H-Index - 167
eISSN - 1615-9861
pISSN - 1615-9853
DOI - 10.1002/pmic.200701126
Subject(s) - computer science , operating system , java , open source , pipeline (software) , graphical user interface , interface (matter) , component (thermodynamics) , license , spec# , source code , user interface , database , programming language , software , physics , bubble , maximum bubble pressure method , thermodynamics
We here present a user-friendly and extremely lightweight tool that can serve as a stand-alone front-end for the Open MS Search Algorithm (OMSSA) search engine, or that can directly be used as part of an informatics processing pipeline for MS driven proteomics. The OMSSA graphical user interface (OMSSAGUI) tool is written in Java, and is supported on Windows, Linux, and OSX platforms. It is an open source under the Apache 2 license and can be downloaded from http://code.google.com/p/mass-spec-gui/.