Open AccessExome sequencing in families with chronic central serous chorioretinopathy
Author(s) -
Schellevis Rosa L.,
van Dijk Elon H. C.,
Breukink Myrte B.,
Keunen Jan E. E.,
Santen Gijs W. E.,
Hoyng Carel B.,
de Jong Eiko K.,
Boon Camiel J. F.,
den Hollander Anneke I.
Publication year - 2019
Publication title -
molecular genetics and genomic medicine
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.765
H-Index - 29
ISSN - 2324-9269
DOI - 10.1002/mgg3.576
Subject(s) - exome sequencing , genetics , mendelian inheritance , exome , biology , candidate gene , genetic heterogeneity , allele , gene , serous fluid , mutation , phenotype , biochemistry
Background Central serous chorioretinopathy (CSC) is a chorioretinal disease characterized by fluid accumulation between the neuroretina and retinal pigment epithelium with unknown etiology. Family studies have suggested a heritable component for CSC with an autosomal dominant inheritance pattern. Therefore, exome sequencing was performed on familial cCSC to indentify the genetic components contributing to familial cCSC. Methods Exome sequencing was performed on 72 individuals of 18 families with CSC. In these families, we determined whether rare genetic variants (minor allele frequency < 1%) were segregated with CSC and also performed familial gene‐burden analysis. Results In total, 11 variants segregated in two out of 18 families. One of these variants, c.4145C>T; p.T1382I (rs61758735) in the PTPRB gene, was also associated with CSC in a large case–control cohort sequenced previously ( p = 0.009). Additionally, in 28 genes two or more different heterozygous variants segregated in two or more families, but no gene showed consistent associations in both the family gene‐burden results and gene‐burden analysis in the case–control cohort. Conclusion We identified potential candidate genes for familial CSC and managed to exclude Mendelian inheritance of variants in one or a limited number of genes. Instead, familial CSC may be a heterogeneous Mendelian disease caused by variants in many different genes, or alternatively CSC may represent a complex disease to which both environmental factors and genetics contribute.