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Lipid profiling using Raman and a modified support vector machine algorithm
Author(s) -
Potcoava Mariana C.,
Futia Gregory L.,
Gibson Emily A.,
Schlaepfer Isabel R.
Publication year - 2021
Publication title -
journal of raman spectroscopy
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.748
H-Index - 110
eISSN - 1097-4555
pISSN - 0377-0486
DOI - 10.1002/jrs.6238
Subject(s) - phospholipid , lipidomics , raman spectroscopy , organelle , chemistry , sterol , lipid droplet , cholesterol , membrane , biochemistry , physics , optics
Abstract Lipid droplets are dynamic organelles that play important cellular roles. They are composed of a phospholipid membrane and a core of triglycerides and sterol esters. Fatty acids have important roles in phospholipid membrane formation, signaling, and synthesis of triglycerides as energy storage. Better non‐invasive tools for profiling and measuring cellular lipids are needed. Here we demonstrate the potential of Raman spectroscopy to determine with high accuracy the composition changes of the fatty acids and cholesterol found in the lipid droplets of prostate cancer cells treated with various fatty acids. The methodology uses a modified least squares fitting (LSF) routine that uses highly discriminatory wavenumbers between the fatty acids present in the sample using a support vector machine algorithm. Using this new LSF routine, Raman micro‐spectroscopy can become a better non‐invasive tool for profiling and measuring fatty acids and cholesterol for cancer biology.