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Cold‐active hydrolases producing bacteria from two different sub‐glacial Himalayan lakes
Author(s) -
Sahay Harmesh,
Babu Bandamaravuri Kishore,
Singh Surendra,
Kaushik Rajeev,
Saxena Anil K.,
Arora Dilip K.
Publication year - 2013
Publication title -
journal of basic microbiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.58
H-Index - 54
eISSN - 1521-4028
pISSN - 0233-111X
DOI - 10.1002/jobm.201200126
Subject(s) - biology , firmicutes , psychrophile , bacteria , amplified ribosomal dna restriction analysis , actinobacteria , extremophile , brackish water , amylase , microorganism , cellulase , 16s ribosomal rna , microbiology and biotechnology , ecology , ribosomal dna , enzyme , phylogenetic tree , biochemistry , genetics , gene , salinity
Microorganisms, native to the cold environments have successfully acclimatized their physiological, metabolic, and biological features, exhibiting uniqueness in their enzymes, proteins, and membrane structures. These cold‐active enzymes have immense biotechnological potential. The diversity of culturable bacteria in two different water lakes (the sub‐glacial freshwater and the brackish) of Himalayas was analyzed using SYBR green staining and cultural methods. A total of 140 bacteria were isolated and were grouped as psychrophiles, psychrotrophs, and psychrotolerant organisms, based on their optimal temperature for growth. The amplified ribosomal DNA restriction analysis using three restriction enzymes facilitated the grouping of these isolates into 96 genotypes at ≥85% polymorphism. Phylogenetic analysis using 16S rRNA gene sequences revealed that the bacterial strains from both lakes belonged to Firmicutes, Proteobacteria (α, β, and γ) or Actinobacteria. Screening of the germplasm for the activity of different cold‐active hydrolases such as protease, amylase, xylanase, and cellulase, revealed that about 16 isolates were positive, and exhibiting a wide range of stability at various temperature and pH. Our results suggest that the distinctly different ecosystems of sub‐glacial freshwater and brackish water lakes have diverse groups of bacteria, which can be an excellent source of extracellular hydrolases with a wide range of thermal stability.