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Human cytomegalovirus genetic variability in strains isolated from Japanese children during 1983–2003
Author(s) -
Tanaka Kaori,
Numazaki Kei,
Tsutsumi Hiroyuki
Publication year - 2005
Publication title -
journal of medical virology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.782
H-Index - 121
eISSN - 1096-9071
pISSN - 0146-6615
DOI - 10.1002/jmv.20366
Subject(s) - human cytomegalovirus , biology , virology , genotype , phylogenetic tree , genetics , clade , genetic variability , hypervariable region , population , gene , cytomegalovirus , molecular epidemiology , polymerase chain reaction , herpesviridae , virus , viral disease , medicine , environmental health
Abstract The genetic variability of 74 human cytomegalovirus (HCMV) clinical isolates from 60 Japanese infants and children during 1983–2003 was investigated, and the relevance to their clinical course was studied. The patients consisted of 10 asymptomatic congenitally infected babies, 45 infected perinatally or postnatally resulting in HCMV mononucleosis/hepatitis and 5 immunocompromised hosts. The hypervariable region of the HCMV genome, that is the a sequence and UL144 region was analyzed using the polymerase chain reaction (PCR) and unrooted phylogenetic trees. HCMV glycoprotein B (gB) polymorphism was also studied. Unrooted phylogenetic trees of a sequence and UL144 allowed the isolates to be grouped to 5 and 3 clades, respectively. Three gB genotypes were also determined. However, there was no correlation between specific genotypes of these three genes and clinical forms, except for congenital infection which fell into one of three clades of the UL144 gene. In addition, the variability of the three genes had no correlation with each other. This implies that study of a single gene is insufficient for investigating the molecular epidemiology of HCMV. This study provides basic data on the genetic variability of HCMV in an Asian population and should help to determine the strains for vaccine candidates. J. Med. Virol. 76:356–360, 2005. © 2005 Wiley‐Liss, Inc.