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Structural requirements for and consequences of an antiviral porphyrin binding to the V3 loop of the human immunodeficiency virus (HIV‐1) envelope glycoprotein gp120
Author(s) -
Neurath A. Robert,
Strick Nathan,
Debnath Asim K.
Publication year - 1995
Publication title -
journal of molecular recognition
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.401
H-Index - 79
eISSN - 1099-1352
pISSN - 0952-3499
DOI - 10.1002/jmr.300080604
Subject(s) - gp41 , v3 loop , allosteric regulation , glycoprotein , binding site , loop (graph theory) , human immunodeficiency virus (hiv) , biology , viral envelope , stereochemistry , plasma protein binding , biochemistry , virology , chemistry , peptide sequence , receptor , genetics , antibody , mathematics , combinatorics , gene , epitope
Abstract Several porphyrin derivatives were reported to have anti‐HIV‐1 activity. Among them, meso ‐teta(4‐carboxyphenyl)porphine (MYCPP) and other carboxyphenyl derivatives were the most potent inhibitors (EC 50 < 0.7 μM). MTCPP bound to the HIV‐1 enveloope glycoprotein gp120 and to full‐length V3 loop peptides corresponding to several HIV‐1 isolates but not to other peptides from gp120+gp41. However, it remained possible that MTCPP bound to HIV‐1 envelop glycoprotein gp120 and to full‐length V3 loop peptides corresponding to several HIV‐1 isolates but not to other peptides from gp120+gp41. However, it remained possible that MTCPP bound to regions on gp120 which cannot be mimicked by peptides. Further characterization of the binding domain for MTCPP is important for understanding the antiviral activity of porphyrins and for the design of anit‐HIV‐1 drugs interfering with functions of the virus envelope. Results presented here show that: (i) deletion of the V3 loop from the gp120 sequence resulted in drastically diminished MTCPP binding, suggesting that the V3 loop is the dominant if not the only target site on gp120; (ii) this site was only partially mimicked by full‐length V3 loop peptides; (iii) MTCPP binding to the gp120 V3 loop elicited allosteric effects resulting in decreased accessibility of the CD4 receptor binding site; (iv) the binding site for MTCPP lies within the central portion of the V3 loop (KSIHIGPGRAFY for the HIV‐1 subtype B consensus sequence) and does not involve directly the GPG apex of the loop. These results may help in designing antiviral compounds with improved activity.