Premium
Potential biomarkers for heart failure
Author(s) -
Wang Che,
Yang Honghui,
Gao Chuanyu
Publication year - 2019
Publication title -
journal of cellular physiology
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.529
H-Index - 174
eISSN - 1097-4652
pISSN - 0021-9541
DOI - 10.1002/jcp.27632
Subject(s) - heart failure , chemistry , computational biology , medicine , biology
Abstract In this study, we identified candidate biomarkers for heart failure (HF). The gene expression profile GSE57338, containing 117 ischemic cardiomyopathic HF and 136 control samples, was downloaded and analyzed using various bioinformatics approaches. In total, 376 differentially expressed genes (DEGs) were identified, and four modules were explored in protein–protein interaction networks. DEGs (including ankyrin repeat and SOCS box‐containing 14 [ ASB14 ]) in the modules were mainly categorized by the function. Several relationships including interferon regulatory factor 1 (IRF1)‐C‐C motif chemokine ligand 5 ( CCL5 ) were revealed in the transcription factor microRNA target gene regulatory network. Gene–drug analysis revealed 11 DEGs (such as the cluster of differentiation 163 [ CD163 ]) for the target drugs. Data verification analysis identified 118 overlapping DEGs including ASB14 , CD163 , and CCL5 . ASB14 may be involved in HF progression via protein ubiquitination and CCL5 may be involved in HF via the IRF1‐CCL5 interaction. Genes including CD163 are potential biomarkers for HF.