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Electronic ground states and vibrational frequency shifts of diatomic ligands in heme adducts
Author(s) -
Liu Yang,
Sun Huai
Publication year - 2011
Publication title -
journal of computational chemistry
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.907
H-Index - 188
eISSN - 1096-987X
pISSN - 0192-8651
DOI - 10.1002/jcc.21709
Subject(s) - diatomic molecule , adduct , heme , chemistry , computational chemistry , atomic physics , physics , molecule , organic chemistry , enzyme
DFT calculations were carried out to study heme complexes with diatomic ligand (CO, NO, or O 2 ) and trans ‐imidazole ligand. The optimized electronic ground states of CO, NO, and O 2 adducts are singlet, doublet, and open‐shell singlet, respectively. For O 2 adduct, the open‐shell singlet is slightly lower in energy than the close‐shell singlet. However, important differences are found in optimized structures and vibrational frequencies. Particularly, the trans ‐imidazole‐induced frequency up‐shift of the FeO(O) stretching mode can be predicted only with the open‐shell singlet as ground state. An analysis of normal modes confirms that the up‐shifts in the bent (NO and O 2 ) adducts are mainly due to mixing of FeX(O) stretching mode with FeXO bending coordinate. Our study of binding mechanism indicates that a secondary source of the upshifts is the diminished weakening of the FeX(O) bonds. The FeX(O) bond strengths are modulated by σ competition mechanism, which weakens the FeX(O) bond and σ–π cooperation mechanism, which only exists in the bent adducts and enforce the FeX(O) bond. © 2010 Wiley Periodicals, Inc. J Comput Chem, 2011

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