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Systematic evaluation of the biological variance within the Raman based colorectal tissue diagnostics
Author(s) -
Vogler Nadine,
Bocklitz Thomas,
Subhi Salah Firas,
Schmidt Carsten,
Bräuer Rolf,
Cui Tiantian,
Mireskandari Masoud,
Greten Florian R.,
Schmitt Michael,
Stallmach Andreas,
Petersen Iver,
Popp Jürgen
Publication year - 2016
Publication title -
journal of biophotonics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.877
H-Index - 66
eISSN - 1864-0648
pISSN - 1864-063X
DOI - 10.1002/jbio.201500237
Subject(s) - colorectal cancer , variance (accounting) , cancer , biopsy , medicine , pathology , computer science , accounting , business
Being among the most common cancers worldwide screening and early diagnosis of colorectal cancer is of high interest for the health system, the patients and for research. Raman microspectroscopy as a label‐free, non‐invasive and non‐destructive technique is a promising tool for an early diagnosis. However, to ensure a reliable diagnosis specially designed statistical analysis workflows are required. Several statistical approaches have been introduced leading to varying results in the overall accuracy, sensitivity and specificity. In this study a systematic evaluation of different statistical analysis approaches has been performed using a colon cancer mouse model with genotypic identical individuals. Based on the inter‐individual Raman spectral variances a measure for the biological variance can be estimated. By applying a leave‐one‐individual‐out cross‐validation a clinically relevant discrimination of healthy tissue versus adenoma and carcinoma with an accuracy of 95% is shown. Furthermore, the transfer of a model from tissue to biopsy specimen is demonstrated.
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