Open AccessAnalysis of TP53 aflatoxin signature mutation in hepatocellular carcinomas from Guatemala: A cross‐sectional study (2016‐2017)
Author(s) -
Alvarez Christian S.,
Ortiz Jeremy,
BendfeldtAvila Giovanna,
Xie Yi,
Wang Mingyi,
Wu Dongjing,
Higson Herbert,
Lee Elisa,
Teshome Kedest,
Barnoya Joaquin,
Kleiner David E.,
Groopman John D.,
Orozco Roberto,
McGlynn Katherine A.,
Gharzouzi Eduardo,
Dean Michael
Publication year - 2020
Publication title -
health science reports
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.462
H-Index - 7
ISSN - 2398-8835
DOI - 10.1002/hsr2.155
Subject(s) - hepatocellular carcinoma , hepatitis b virus , medicine , incidence (geometry) , mutation , aflatoxin , liver cancer , hepatitis b , hccs , virology , oncology , gastroenterology , gene , biology , virus , genetics , physics , optics , food science
Background and aims Guatemala has the highest incidence of hepatocellular carcinoma (HCC) in the Western hemisphere. The major risk factors in Guatemala are not well characterized, but the prevalence of hepatitis B virus (HBV) and hepatitis C virus (HCV) appears to be low, while the prevalence of aflatoxin (AFB 1 ) exposure appears to be high. To examine whether AFB 1 may contribute to the elevated incidence of HCC in Guatemala, this study examined the frequency of the AFB 1 ‐signature mutation in the TP53 gene (R249S) as well as other somatic mutations. In addition, we assessed whether the frequency of the TP53 mutation differed by sex. Methods Formalin‐fixed, paraffin‐embedded (FFPE) HCC tissues were obtained from three hospitals in Guatemala City between 2016 and 2017. In addition, tumor tissues preserved in RNAlater were also obtained. Sociodemographic and clinical information including HBV and HCV status were collected. Targeted sequencing of TP53 was performed in the FFPE samples, and a panel of 253 cancer‐related genes was sequenced in the RNAlater samples. Results Ninety‐one FFPE tissues were examined, from 52 men and 39 women. Median (IQR) age at diagnosis was 62 (51‐70). Among those with known HBV and HCV status, two were HBV+ and three were HCV+. Overall, 47% of the HCCs had a TP53 mutation. The AFB 1 ‐signature R249S mutation was present in 24%. No overlap between the R249S mutation and HBV+ was observed in this cohort. Among 18 RNAlater samples examined, 44% had any TP53 mutation and 33% had the R249S mutation. Other somatic mutations were identified in known HCC driver genes. Conclusions The presence of the TP53 R249S mutation in the samples studied suggests that AFB 1 may contribute to the high incidence of HCC in Guatemala. The proportion of HBV+ tumors was low, suggesting that AFB 1 may be associated with HCC in the absence of concomitant HBV infection. Further investigation of AFB 1 and other risk factors for HCC in Guatemala is warranted.