Open AccessTowards a quantitative assessment of inorganic carbon cycling in photosynthetic microorganisms
Author(s) -
Müller Stefan,
Zavřel Tomáš,
Červený Jan
Publication year - 2019
Publication title -
engineering in life sciences
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.547
H-Index - 57
eISSN - 1618-2863
pISSN - 1618-0240
DOI - 10.1002/elsc.201900061
Subject(s) - cycling , microorganism , photosynthesis , carbon cycle , carbon fibers , environmental science , environmental chemistry , ecology , biology , biochemical engineering , chemistry , botany , bacteria , engineering , computer science , geography , ecosystem , forestry , composite number , genetics , algorithm
Photosynthetic organisms developed various strategies to mitigate high light stress. For instance, aquatic organisms are able to spend excessive energy by exchanging dissolved CO 2 (dCO 2 ) and bicarbonate ( HCO 3 − ) with the environment. Simultaneous uptake and excretion of the two carbon species is referred to as inorganic carbon cycling. Often, inorganic carbon cycling is indicated by displacements of the extracellular dCO 2 signal from the equilibrium value after changing the light conditions. In this work, we additionally use (i) the extracellular pH signal, which requires non‐ or weakly‐buffered medium, and (ii) a dynamic model of carbonate chemistry in the aquatic environment to detect and quantitatively describe inorganic carbon cycling. Based on simulations and experiments in precisely controlled photobioreactors, we show that the magnitude of the observed dCO 2 displacement crucially depends on extracellular pH level and buffer concentration. Moreover, we find that the dCO 2 displacement can also be caused by simultaneous uptake of both dCO 2 and HCO 3 − (no inorganic carbon cycling). In a next step, the dynamic model of carbonate chemistry allows for a quantitative assessment of cellular dCO 2 , HCO 3 − , and H + exchange rates from the measured dCO 2 and pH signals. Limitations of the method are discussed.